* Package: sci-libs/cgnslib-4.4.0-r1:0/4.4  * Repository: gentoo  * Maintainer: sci@gentoo.org  * USE: abi_x86_64 amd64 elibc_glibc examples fortran hdf5 kernel_linux mpi szip tools  * FEATURES: ccache network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking cgnslib-4.4.0.tar.gz to /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work >>> Source unpacked in /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work >>> Preparing source in /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0 ... * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0" * Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build" * Hardcoded definition(s) removed in CMakeLists.txt: * set(CMAKE_BUILD_TYPE "Release" CACHE STRING "Choose the type of build." F >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0 ... * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0" * Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build" cmake -C /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DCGNS_BUILD_SHARED=ON -DCGNS_USE_SHARED=ON -DCGNS_BUILD_CGNSTOOLS=yes -DCGNS_ENABLE_BASE_SCOPE=no -DCGNS_ENABLE_FORTRAN=yes -DCGNS_ENABLE_HDF5=yes -DCGNS_ENABLE_LEGACY=no -DCGNS_ENABLE_SCOPING=no -DCGNS_ENABLE_MEM_DEBUG=no -DCGNS_ENABLE_TESTS=no -DHDF5_NEED_MPI=yes -DHDF5_NEED_SZIP=yes -DHDF5_NEED_ZLIB=yes -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build/gentoo_toolchain.cmake /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0 loading initial cache file /var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build/gentoo_common_config.cmake -- The C compiler identification is GNU 13.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc-13 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of long -- Check size of long - done -- Check size of off_t -- Check size of off_t - done -- The Fortran compiler identification is GNU 14.1.1 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/x86_64-pc-linux-gnu-gfortran - skipped -- Detecting Fortran/C Interface Failed to compile CMake Error at CMakeLists.txt:174 (string): string sub-command REGEX, mode MATCH needs at least 5 arguments total to command. -- Fortran name mangling convention: UNKNOWN -- HDF5 find comps: C;shared -- Could NOT find HDF5 (missing: HDF5_DIR) -- HDF5 C libs:0 static: and shared: -- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libpthread.a;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.a;/usr/lib64/libm.so (found version "1.14.4-2") -- HDF5-1.14.4-2 found: INC=/usr/include TOOLS=/../bin HDF5_BUILD_SHARED_LIBS=1 -- HDF5 link libs: /usr/lib64/libhdf5.so;/usr/lib64/libpthread.a;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.a;/usr/lib64/libm.so -- Found MPI_C: /usr/lib64/libmpi.so (found version "3.1") -- Found MPI_Fortran: /usr/lib64/libmpifort.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Checking C compiler flag -std=gnu99 -- Performing Test std-gnu99 -- Performing Test std-gnu99 - Success -- Testing Fortran Fortran2003 - OK -- Testing Fortran Fortran2008TS - OK -- Testing Fortran Fortran2008 - OK -- Testing Fortran Sizeof_int - OK -- Testing Fortran FortranConcat - Fail -- Testing HDF5 Multi_Dataset - OK -- Testing HDF5 Collective_metadata - OK -- Testing HDF5 H5Pset_file_space_strategy - OK -- Performing Test CHECK_HAVE_STAT64_STRUCT -- Performing Test CHECK_HAVE_STAT64_STRUCT - Failed -- Found X11: /usr/include -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found Tclsh: /bin/tclsh (found version "8.6") -- Found TCL: /usr/lib64/libtcl.so -- Found TCLTK: /usr/lib64/libtcl.so -- Found TK: /usr/lib64/libtk.so -- <<< Gentoo configuration >>> Build type RelWithDebInfo Install path /usr Compiler flags: C -march=native -O2 -pipe -fomit-frame-pointer C++ Linker flags: Executable -Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs Module -Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs Shared -Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs -- Configuring incomplete, errors occurred! * ERROR: sci-libs/cgnslib-4.4.0-r1::gentoo failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 136: Called src_configure * environment, line 2253: Called cmake_src_configure * environment, line 1131: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=sci-libs/cgnslib-4.4.0-r1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/cgnslib-4.4.0-r1::gentoo'`. * The complete build log is located at '/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0_build' * S: '/var/tmp/portage/sci-libs/cgnslib-4.4.0-r1/work/CGNS-4.4.0'